STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03739.1Aspartate aminotransferase. (398 aa)    
Predicted Functional Partners:
AKJ07887.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
    
 0.911
AKJ01465.1
Hypothetical protein.
  
  
 
0.907
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.907
AKJ06839.1
Putative ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.907
AKJ07885.1
N-succinyl-L,L-diaminopimelate desuccinylase.
    
 0.904
AKJ01515.1
Xanthine dehydrogenase, molybdenum binding subunit.
 
 
  
 0.765
AKJ03738.1
PAP2 family protein.
       0.727
AKJ01514.1
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
      0.712
AKJ03741.1
Hydroxymethylglutaryl-CoA lyase.
  
  
 0.624
AKJ03740.1
Methyltransferase type 11.
       0.572
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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