STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03740.1Methyltransferase type 11. (256 aa)    
Predicted Functional Partners:
AKJ03741.1
Hydroxymethylglutaryl-CoA lyase.
  
    0.790
icmF
B12 binding domain / kinase domain / Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
       0.782
AKJ03739.1
Aspartate aminotransferase.
       0.572
AKJ03738.1
PAP2 family protein.
       0.540
AKJ00687.1
Cell division protein FtsK.
  
     0.453
AKJ05261.1
Glutamine amidotransferases class-II.
  
     0.449
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
     0.442
AKI98965.1
Tryptophan synthase alpha chain.
  
     0.419
AKJ06403.1
Membrane protein.
  
     0.417
AKJ08116.1
Chemotaxis protein methyltransferase CheR.
  
     0.416
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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