STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03762.1Hypothetical protein. (405 aa)    
Predicted Functional Partners:
AKJ03564.1
Putative secreted protein.
  
     0.710
AKJ01921.1
Hypothetical protein.
  
     0.655
AKJ03761.1
Trypsin domain protein.
       0.623
AKJ06761.1
Molybdate metabolism regulator.
  
     0.565
AKJ06926.1
Hypothetical protein.
  
     0.562
AKJ03763.1
Hypothetical protein.
       0.561
AKJ03764.1
ABC transporter, ATPase subunit.
       0.547
AKJ03765.1
ABC-2 type transporter.
       0.547
AKJ04869.1
Putative signal peptide protein.
  
     0.534
AKJ06158.1
Glucan endo-1,3-beta-glucosidase A1.
  
     0.526
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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