STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03764.1ABC transporter, ATPase subunit. (251 aa)    
Predicted Functional Partners:
AKJ03765.1
ABC-2 type transporter.
 
  
 0.965
AKJ03763.1
Hypothetical protein.
       0.752
AKJ03762.1
Hypothetical protein.
       0.547
AKI98409.1
Membrane protein.
  
 
 0.474
AKI99972.1
Membrane protein.
  
 
 0.474
AKJ02488.1
Membrane protein.
  
 
 0.474
AKJ03766.1
Sensory transduction histidine kinase.
       0.463
AKJ03761.1
Trypsin domain protein.
       0.450
AKJ04774.1
Pectin lyase like protein.
  
 
 0.450
AKJ01935.1
ABC transporter, permease protein.
  
 0.448
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.