STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03766.1Sensory transduction histidine kinase. (204 aa)    
Predicted Functional Partners:
AKJ03767.1
Chemotaxis protein methyltransferase CheR.
   
   0.734
AKJ02525.1
Hypothetical protein.
  
     0.608
AKJ03768.1
Metallopeptidase.
       0.586
AKI99839.1
Phytochrome, two-component sensor histidine kinase.
 
 0.572
AKJ02027.1
Hypothetical protein.
  
     0.548
AKJ01683.1
Hypothetical protein.
  
     0.546
AKJ03765.1
ABC-2 type transporter.
 
    0.530
AKJ00124.1
Phytochrome, two-component sensor histidine kinase.
 
 0.474
AKJ07503.1
Putative polyvinyl-alcohol dehydrogenase.
  
     0.466
AKJ06986.1
Phytochrome, two-component sensor histidine kinase.
 
 
 
 0.465
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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