STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03778.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
AKJ03777.1
Glutathione S-transferase.
       0.773
AKI99740.1
Hypothetical protein.
  
     0.688
AKJ07049.1
Hypothetical protein.
  
     0.686
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.685
AKJ03516.1
Hypothetical protein.
  
    0.684
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
     0.624
AKJ00845.1
Hypothetical protein.
  
     0.623
AKJ07608.1
Alg9 family protein mannosyltransferase.
  
     0.593
AKJ00154.1
Hypothetical protein.
  
     0.587
AKJ07493.1
Cytochrome c family protein.
  
     0.565
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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