STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03799.1Transcriptional regulator, HxlR family. (170 aa)    
Predicted Functional Partners:
AKJ06193.1
Transcriptional regulator, HxlR family.
  
     0.715
AKI98859.1
Redox-sensing transcriptional regulator QorR.
  
     0.675
AKJ03800.1
Hypothetical protein.
       0.664
AKJ03801.1
Adenylate cyclase.
  
    0.582
AKJ03798.1
Beta-lactamase class C and other penicillin binding protein.
       0.545
AKJ03797.1
Epoxide hydrolase.
 
     0.540
AKI98831.1
Flavin reductase.
  
  
 0.525
AKJ00400.1
Programmed cell death toxin YdcE; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.522
AKI98542.1
Lactoylglutathione lyase.
 
    0.465
AKJ03802.1
Hypothetical protein.
       0.446
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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