STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03891.1Putative Isoquinoline 1-oxidoreductase. (185 aa)    
Predicted Functional Partners:
AKJ03893.1
Isoquinoline 1-oxidoreductase beta subunit.
 
    0.880
AKJ03892.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
     0.825
AKJ07688.1
Hypothetical protein.
  
     0.614
AKJ02201.1
Hypothetical protein.
  
     0.536
AKJ01320.1
Hypothetical protein.
  
     0.530
AKJ07985.1
Glutamate synthase [NADPH] large chain.
  
     0.530
AKJ05775.1
Peptidoglycan binding domain protein.
  
     0.494
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.489
AKJ07549.1
Hypothetical protein.
  
     0.476
AKJ04075.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.