STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03949.1Diguanylate cyclase/phosphodiesterase. (1084 aa)    
Predicted Functional Partners:
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.986
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.986
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.947
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
 
 
0.945
AKJ00035.1
Hypothetical protein.
 
 
0.919
AKJ01622.1
Circadian input kinase A.
 
 
0.915
AKI99496.1
PAS/PAC domain protein.
 
 
0.885
AKJ05960.1
Chemotaxis protein methyltransferase CheR.
 
 
0.872
AKJ02816.1
Sensor histidine kinase/response rgulator.
 
 
 0.856
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.854
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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