STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03970.1Cholesterol oxidase. (347 aa)    
Predicted Functional Partners:
AKJ03969.1
Cholesterol oxidase precursor protein.
     0.990
AKJ03968.1
Cholesterol oxidase.
     0.989
AKJ01755.1
Cholesterol oxidase.
     0.976
AKJ01756.1
Cholesterol oxidase.
 
   
 0.788
AKJ01988.1
Putative cholesterol oxidase.
     0.530
AKJ08234.1
Hypothetical protein.
 
     0.457
AKJ08123.1
Hypothetical protein.
 
     0.452
AKJ03966.1
Cytochrome P450.
       0.443
AKJ03967.1
Hypothetical protein.
       0.443
AKJ05734.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.