STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03976.1Type I restriction-modification system, DNA-methyltransferase subunit M. (187 aa)    
Predicted Functional Partners:
AKJ05576.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.944
AKJ06622.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.944
AKJ05578.1
Type I restriction-modification system, restriction subunit R.
 
 
 0.918
AKJ03975.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
     0.775
AKJ05575.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
     0.774
AKI98952.1
DNA/RNA helicase of DEAD/DEAH box family.
 
 
 0.663
AKJ07177.1
Putative ATP-dependent endonuclease.
  
  
 0.551
AKJ07172.1
Hypothetical protein.
  
  
 0.460
AKJ04086.1
Hypothetical protein.
  
    0.454
AKJ02434.1
DNA helicase.
  
  
 0.448
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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