STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03981.1Beta-lactamase. (290 aa)    
Predicted Functional Partners:
AKJ06335.1
Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
     
  0.900
AKJ00171.1
Beta-lactamase.
 
    
 0.890
AKJ03982.1
Amino acid permease.
 
     0.637
AKJ07020.1
Beta-lactamase.
 
    
 0.623
AKJ03009.1
D-aminopeptidase.
 
     0.514
AKI98853.1
Secreted glycosyl hydrolase.
  
     0.447
AKJ02868.1
HrpA-like helicase.
  
     0.426
AKJ01363.1
Beta-peptidyl aminopeptidase.
 
     0.417
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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