STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03999.1ATP-dependent Clp protease ATP-binding subunit ClpA. (766 aa)    
Predicted Functional Partners:
AKJ04000.1
ATP-dependent Clp protease ATP-binding subunit ClpA.
 
    
0.833
AKJ04001.1
ClpB protein.
 
    
0.831
AKJ03998.1
DnaJ domain protein.
       0.732
AKJ05650.1
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 
 0.715
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.710
clpP-2
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.709
AKJ00072.1
Hypothetical protein.
  
 
 0.702
AKJ04002.1
Hypothetical protein.
  
    0.698
AKJ04884.1
Molecular chaperone; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.649
AKI99413.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 
 0.634
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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