STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04038.1Pyridoxamine 5'-phosphate oxidase. (151 aa)    
Predicted Functional Partners:
AKJ01702.1
Hypothetical protein.
  
     0.733
AKJ02404.1
TPR domain protein, putative component of TonB system.
  
     0.694
AKJ07673.1
Two-component system response regulator CreC.
  
     0.693
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
     0.689
AKJ05033.1
AglU.
  
    0.687
AKJ00779.1
Cell division protein FtsK.
  
     0.672
AKI99203.1
Putative asmA protein precursor.
  
     0.655
AKJ07934.1
Hypothetical protein.
  
     0.650
AKJ04037.1
Hypothetical protein.
       0.648
AKJ07662.1
Hypothetical protein.
  
     0.619
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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