STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04049.1N-acetylmuramoyl-L-alanine amidase. (592 aa)    
Predicted Functional Partners:
AKJ01730.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.914
AKJ04228.1
N-acetylmuramoyl-L-alanine amidase AmiB precursor.
     
  0.900
AKJ04050.1
Hypothetical protein.
       0.566
AKJ06569.1
Hypothetical protein.
  
     0.549
AKJ04048.1
Hypothetical protein.
       0.542
AKJ01306.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
   0.535
AKJ04898.1
Cell division initiation protein DivIVA.
 
   
 0.518
AKJ06607.1
Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP.
 
   
 0.518
AKJ01263.1
Molybdopterin binding protein; Belongs to the CinA family.
 
     0.504
AKJ04051.1
Hypothetical protein.
       0.502
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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