STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04095.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
AKJ04091.1
Protein ImpG/VasA.
 
 
 0.955
AKJ04098.1
Hypothetical protein.
 
  
 0.893
AKJ04097.1
Hypothetical protein.
 
  
 0.848
AKJ04094.1
Hypothetical protein.
  
  
 0.841
AKJ00072.1
Hypothetical protein.
  
  
 0.798
AKJ04090.1
Hypothetical protein.
  
  
 0.792
AKJ04093.1
Hypothetical protein.
       0.785
AKI99740.1
Hypothetical protein.
  
     0.770
AKJ07515.1
Microbial collagenase, secreted.
  
     0.769
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.764
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.