STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04098.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
AKJ04097.1
Hypothetical protein.
 
 0.986
AKJ02237.1
Hypothetical protein.
 
 0.962
AKJ06815.1
Hypothetical protein.
 
 0.962
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
 
 
 0.954
AKJ02240.1
Hypothetical protein.
 
  
 0.940
AKJ00072.1
Hypothetical protein.
 
 
 0.920
AKJ06809.1
Hypothetical protein.
 
  
 0.904
AKJ02243.1
Hypothetical protein.
 
  
 0.903
AKJ02233.1
Hypothetical protein.
 
  
 0.895
AKJ06819.1
Hypothetical protein.
 
  
 0.895
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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