STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04118.1Hypothetical protein. (541 aa)    
Predicted Functional Partners:
AKI99595.1
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
     0.749
AKJ05674.1
Phage tail fiber protein.
  
     0.747
AKJ03190.1
DNA gyrase subunit A.
  
     0.622
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.607
AKI98993.1
Putative DNA-binding regulatory protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.596
AKI98444.1
Hypothetical protein.
  
     0.587
AKJ05747.1
Glutaredoxin-related protein.
  
     0.557
AKJ05772.1
Adenylate cyclase.
  
     0.556
AKJ00535.1
Transposase.
  
     0.546
AKJ00754.1
Internalin, putative.
  
     0.541
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.