Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99094.1 | AKI99331.1 | AA314_00721 | AA314_00958 | Threonine dehydratase. | Serine--glyoxylate aminotransferase. | 0.923 |
AKI99094.1 | AKJ03196.1 | AA314_00721 | AA314_04822 | Threonine dehydratase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.951 |
AKI99094.1 | AKJ04165.1 | AA314_00721 | AA314_05791 | Threonine dehydratase. | Low-specificity L-threonine aldolase. | 0.912 |
AKI99094.1 | AKJ06883.1 | AA314_00721 | AA314_08509 | Threonine dehydratase. | Threonine dehydratase. | 0.920 |
AKI99094.1 | AKJ06954.1 | AA314_00721 | AA314_08580 | Threonine dehydratase. | Threonine dehydratase. | 0.928 |
AKI99094.1 | AKJ07377.1 | AA314_00721 | AA314_09003 | Threonine dehydratase. | Threonine synthase. | 0.963 |
AKI99094.1 | gcvP | AA314_00721 | AA314_06614 | Threonine dehydratase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.404 |
AKI99094.1 | glyA | AA314_00721 | AA314_04148 | Threonine dehydratase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.914 |
AKI99331.1 | AKI99094.1 | AA314_00958 | AA314_00721 | Serine--glyoxylate aminotransferase. | Threonine dehydratase. | 0.923 |
AKI99331.1 | AKJ04158.1 | AA314_00958 | AA314_05784 | Serine--glyoxylate aminotransferase. | Sarcosine oxidase alpha subunit. | 0.905 |
AKI99331.1 | AKJ04159.1 | AA314_00958 | AA314_05785 | Serine--glyoxylate aminotransferase. | Sarcosine oxidase beta subunit. | 0.928 |
AKI99331.1 | AKJ04165.1 | AA314_00958 | AA314_05791 | Serine--glyoxylate aminotransferase. | Low-specificity L-threonine aldolase. | 0.922 |
AKI99331.1 | AKJ06883.1 | AA314_00958 | AA314_08509 | Serine--glyoxylate aminotransferase. | Threonine dehydratase. | 0.923 |
AKI99331.1 | AKJ06954.1 | AA314_00958 | AA314_08580 | Serine--glyoxylate aminotransferase. | Threonine dehydratase. | 0.923 |
AKI99331.1 | gcvP | AA314_00958 | AA314_06614 | Serine--glyoxylate aminotransferase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.937 |
AKI99331.1 | glyA | AA314_00958 | AA314_04148 | Serine--glyoxylate aminotransferase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.933 |
AKJ03196.1 | AKI99094.1 | AA314_04822 | AA314_00721 | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Threonine dehydratase. | 0.951 |
AKJ03196.1 | AKJ04165.1 | AA314_04822 | AA314_05791 | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Low-specificity L-threonine aldolase. | 0.921 |
AKJ03196.1 | AKJ06883.1 | AA314_04822 | AA314_08509 | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Threonine dehydratase. | 0.951 |
AKJ03196.1 | AKJ06954.1 | AA314_04822 | AA314_08580 | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Threonine dehydratase. | 0.951 |
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