STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04236.1Serine protease precursor MucD/AlgY associated with sigma factor RpoE. (443 aa)    
Predicted Functional Partners:
AKJ04235.1
FHA domain protein.
 
     0.945
AKJ07199.1
HtrA protease/chaperone protein.
  
 
 
 0.750
AKI99420.1
Serine protease.
  
     0.739
AKJ04237.1
Hypothetical protein.
       0.658
AKJ05749.1
F5/8 type C domain protein.
  
 
   0.542
AKJ05929.1
F5/8 type C domain protein.
  
 
   0.530
AKJ00343.1
Internalin, putative.
  
    0.511
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.487
AKJ04963.1
Extracellular alginate lyase.
  
 
   0.482
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
  
 0.477
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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