STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04242.1Serine/threonine protein kinase. (602 aa)    
Predicted Functional Partners:
AKJ04243.1
Tetratricopeptide repeat domain protein.
       0.807
AKJ04244.1
Response regulatory protein.
  
    0.764
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
   0.730
AKI99585.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.683
AKJ03260.1
Serine/threonine protein kinase PrkC, regulator of stationary phase.
  
     0.683
AKJ06283.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.682
AKJ05907.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.674
AKJ01895.1
Putative protein phosphatase.
   0.673
AKJ01181.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.667
AKJ04241.1
Tetratricopeptide repeat protein.
       0.497
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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