STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04268.1Hypothetical protein. (434 aa)    
Predicted Functional Partners:
secA
Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 
 0.899
AKJ07791.1
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
  
 0.767
AKI99751.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
  
     0.752
AKI99753.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
  
     0.720
AKJ04267.1
Hypothetical protein.
       0.705
AKI99978.1
Trans-aconitate 2-methyltransferase.
  
     0.700
AKJ04128.1
Hypothetical protein.
  
     0.674
AKJ00312.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.623
AKJ02530.1
Carbon monoxide oxidation accessory protein CoxG.
  
     0.622
AKJ00989.1
Transcriptional regulator, AraC family.
  
     0.611
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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