STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04298.1Tetratricopeptide repeat family. (462 aa)    
Predicted Functional Partners:
AKJ02837.1
TPR domain protein, putative component of TonB system.
 
 
 0.782
AKJ01984.1
TPR repeat protein.
 
   0.776
AKJ04918.1
TPR domain protein, putative component of TonB system.
  
     0.769
AKJ03134.1
Tetratricopeptide repeat protein.
 
   0.764
AKJ02757.1
TPR domain protein, putative component of TonB system.
  
     0.763
AKJ08293.1
TPR repeat protein.
  
     0.759
AKJ02628.1
TPR domain protein, putative component of TonB system.
  
     0.718
AKJ04299.1
TPR domain protein, putative component of TonB system.
 
     0.715
AKJ02704.1
Hypothetical protein.
  
     0.712
AKJ00320.1
TPR repeat protein.
  
     0.674
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.