STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04375.1Hypothetical protein; Belongs to the sulfur carrier protein TusA family. (80 aa)    
Predicted Functional Partners:
AKJ04373.1
Molybdopterin biosynthesis protein MoeA.
 
   
 0.948
AKJ04376.1
Sulfur carrier protein adenylyltransferase ThiF.
 
   
 0.901
AKJ04374.1
Molybdenum cofactor biosynthesis protein MoaD.
 
 
 
 0.890
AKJ05568.1
Sulfur carrier protein adenylyltransferase ThiF.
 
  
 0.787
AKJ01532.1
Cysteine desulfurase.
   
 
 0.640
iscS
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 
 0.640
AKJ05058.1
Cysteine desulfurase.
   
 
 0.640
AKJ04441.1
Putative transmembrane protein.
  
  
 0.560
AKJ04442.1
Hypothetical protein.
  
  
 0.560
AKJ04377.1
Hypothetical protein.
       0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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