STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04414.1Putative transmembrane anti-sigma factor. (275 aa)    
Predicted Functional Partners:
AKJ04413.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.741
AKJ02715.1
TolA protein.
  
     0.702
AKI99445.1
Hypothetical protein.
  
     0.653
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
     0.644
AKJ02813.1
Tetratricopeptide repeat domain protein.
 
     0.597
AKJ00779.1
Cell division protein FtsK.
 
     0.584
AKJ07642.1
Hypothetical protein.
  
     0.552
AKJ07626.1
Tryptophan synthase alpha chain.
 
     0.545
AKJ07643.1
TPR domain protein.
  
     0.539
AKJ03257.1
Adventurous gliding motility protein K.
  
     0.538
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.