STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04433.1Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. (332 aa)    
Predicted Functional Partners:
AKJ06906.1
O-acetylhomoserine sulfhydrylase.
 
  
 0.817
AKJ01681.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.697
AKJ04432.1
Hypothetical protein.
       0.558
AKJ05005.1
Aspartokinase.
 
  
 0.515
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.504
AKJ01205.1
TolA protein.
   
    0.451
AKJ03504.1
Peptidyl-dipeptidase A precursor.
   
    0.451
AKJ03506.1
Hypothetical protein.
   
    0.451
AKJ06344.1
Chromosome partition protein smc.
   
    0.451
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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