STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04439.1Phosphoglycolate phosphatase. (217 aa)    
Predicted Functional Partners:
AKJ01471.1
Phosphoglycolate phosphatase.
  
  
  0.954
AKJ07961.1
Phosphoglycolate phosphatase.
  
  
  0.954
AKJ05966.1
Phosphoglycolate phosphatase.
  
  
 
0.923
AKJ01892.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
AKJ05094.1
Glycolate dehydrogenase.
    
 0.904
AKJ05873.1
Glycolate dehydrogenase.
    
 0.904
AKJ04939.1
Hydrolase, haloacid dehalogenase-like family.
     
  0.900
AKJ04438.1
Hypothetical protein.
       0.757
AKJ06979.1
Epoxyqueuosine.
    
 0.548
AKJ07209.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.532
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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