STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cccA-5Cytochrome c family protein. (205 aa)    
Predicted Functional Partners:
hybA
Anaerobic dehydrogenase and Fe-S-cluster domain.
 
 
 0.998
Minf_1959
Conserved hypothetical protein.
 
   0.995
Minf_1962
Cytochrome c3.
 
 
 
 0.979
Minf_1957
Conserved hypothetical protein.
 
 
 0.974
Minf_1960
Polysulphide reductase.
 
 
   0.964
cyoC
Heme/copper-type cytochrome oxidase, subunit 3.
 
 
 0.886
Minf_0485
Polysulphide reductase.
 
   0.874
ccoN
Cbb3-type cytochrome oxidase, subunit 1.
 
 
 0.831
ccoO
Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.775
Minf_1956
Conserved hypothetical protein.
       0.766
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.