Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Minf_1369 | Minf_1711 | Minf_1369 | Minf_1711 | Aspartate/tyrosine/aromatic aminotransferase. | Chorismate mutase; pheA-like. | 0.907 |
Minf_1369 | argB | Minf_1369 | Minf_0290 | Aspartate/tyrosine/aromatic aminotransferase. | Acetylglutamate kinase and N-acetylglutamate synthase family enzyme; Belongs to the acetyltransferase family. | 0.912 |
Minf_1369 | hisC | Minf_1369 | Minf_0206 | Aspartate/tyrosine/aromatic aminotransferase. | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.921 |
Minf_1369 | katG | Minf_1369 | Minf_2274 | Aspartate/tyrosine/aromatic aminotransferase. | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.900 |
Minf_1369 | pheA | Minf_1369 | Minf_0961 | Aspartate/tyrosine/aromatic aminotransferase. | Prephenate dehydratase. | 0.908 |
Minf_1711 | Minf_1369 | Minf_1711 | Minf_1369 | Chorismate mutase; pheA-like. | Aspartate/tyrosine/aromatic aminotransferase. | 0.907 |
Minf_1711 | hisC | Minf_1711 | Minf_0206 | Chorismate mutase; pheA-like. | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.934 |
Minf_1711 | katG | Minf_1711 | Minf_2274 | Chorismate mutase; pheA-like. | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.800 |
Minf_1711 | pheA | Minf_1711 | Minf_0961 | Chorismate mutase; pheA-like. | Prephenate dehydratase. | 0.948 |
Minf_2273 | katG | Minf_2273 | Minf_2274 | Hypothetical protein. | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.572 |
argB | Minf_1369 | Minf_0290 | Minf_1369 | Acetylglutamate kinase and N-acetylglutamate synthase family enzyme; Belongs to the acetyltransferase family. | Aspartate/tyrosine/aromatic aminotransferase. | 0.912 |
argB | katG | Minf_0290 | Minf_2274 | Acetylglutamate kinase and N-acetylglutamate synthase family enzyme; Belongs to the acetyltransferase family. | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.400 |
hisC | Minf_1369 | Minf_0206 | Minf_1369 | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Aspartate/tyrosine/aromatic aminotransferase. | 0.921 |
hisC | Minf_1711 | Minf_0206 | Minf_1711 | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Chorismate mutase; pheA-like. | 0.934 |
hisC | katG | Minf_0206 | Minf_2274 | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.906 |
hisC | pheA | Minf_0206 | Minf_0961 | Histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Prephenate dehydratase. | 0.930 |
katG | Minf_1369 | Minf_2274 | Minf_1369 | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Aspartate/tyrosine/aromatic aminotransferase. | 0.900 |
katG | Minf_1711 | Minf_2274 | Minf_1711 | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Chorismate mutase; pheA-like. | 0.800 |
katG | Minf_2273 | Minf_2274 | Minf_2273 | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Hypothetical protein. | 0.572 |
katG | argB | Minf_2274 | Minf_0290 | Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Acetylglutamate kinase and N-acetylglutamate synthase family enzyme; Belongs to the acetyltransferase family. | 0.400 |
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