STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
padENADH-dependent phenylglyoxylate dehydrogenase subunit gamma. (209 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 0.997
OPX42212.1
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 0.957
OPX43184.1
2-oxoacid ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 0.908
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 0.879
porB
Pyruvate synthase subunit PorB.
  
 0.843
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.827
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.815
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
 
 0.813
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
  
 0.789
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
    
 0.788
Your Current Organism:
Ruminiclostridium hungatei
NCBI taxonomy Id: 48256
Other names: ATCC 700212, Clostridium hungatei, Clostridium hungatei Monserrate et al. 2001, DSM 14427, R. hungatei, strain AD
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