STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163J9I1U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (724 aa)    
Predicted Functional Partners:
A0A163JYU2
U3 small nucleolar RNA-associated protein 22.
   
 0.999
A0A168QLD1
Sas10 domain-containing protein.
   
 0.999
A0A163IUQ3
Uncharacterized protein.
   
 0.998
A0A168LAV1
Uncharacterized protein.
   
  0.998
A0A168PBD8
WD_REPEATS_REGION domain-containing protein.
   
 0.998
A0A168R6B7
Uncharacterized protein.
   
 0.998
A0A168N7I8
Uncharacterized protein.
   
 
 0.997
A0A168R0F6
WD_REPEATS_REGION domain-containing protein.
   
 
  0.997
A0A168SEA0
Uncharacterized protein.
   
 0.997
A0A168LUD9
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.995
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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