STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163JI16WD_REPEATS_REGION domain-containing protein. (482 aa)    
Predicted Functional Partners:
A0A168QQG7
Uncharacterized protein.
   
 
 0.945
A0A168PBD8
WD_REPEATS_REGION domain-containing protein.
   
 
 0.938
A0A168QPC3
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.937
A0A168N7I8
Uncharacterized protein.
   
 
 0.920
A0A168SJU4
WD_REPEATS_REGION domain-containing protein.
   
  
0.915
A0A168RXN8
WD_REPEATS_REGION domain-containing protein.
   
  
 0.914
A0A168RYF1
Uncharacterized protein.
   
 
 0.910
A0A163JHA0
Uncharacterized protein.
   
   0.905
A0A163JXN4
Uncharacterized protein.
   
  
 0.905
A0A168R3U6
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.900
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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