STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163K4T4Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
A0A168Q640
Uncharacterized protein.
    
 0.851
A0A168KZD7
Small nuclear ribonucleoprotein Sm D3.
    
 0.804
A0A168L0N1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.799
A0A163IU17
Uncharacterized protein; Belongs to the universal ribosomal protein uL15 family.
    
  0.765
A0A163TFC3
Uncharacterized protein.
    
  0.765
A0A163MSY6
RRM domain-containing protein.
    
 0.743
A0A168LMC0
RRM domain-containing protein.
    
 0.743
A0A168QVA4
Uncharacterized protein.
    
 0.743
A0A163MSA0
BRO1 domain-containing protein.
    
 0.741
A0A168MJF6
Small nuclear ribonucleoprotein Sm D2.
    
 0.732
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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