A0A163MQA6 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A163MQA6

Uncharacterized protein. (666 aa)

Predicted Functional Partners:

A0A168KZV1

0.978

A0A163TF89

0.972

A0A168QNY9

0.972

A0A163IRX7

0.711

A0A163J2B5

0.711

A0A163J4V1

0.711

A0A163JBE1

0.711

A0A163K293

0.711

A0A163LVN1

0.711

A0A163MN36

0.711

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163IRX7	A0A163MQA6	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A163IRX7	A0A163TF89	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163IRX7	A0A168KZV1	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A163IRX7	A0A168QNY9	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163J2B5	A0A163MQA6	CDT1 domain-containing protein.	Uncharacterized protein.	0.711
A0A163J2B5	A0A163TF89	CDT1 domain-containing protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163J2B5	A0A168KZV1	CDT1 domain-containing protein.	Uncharacterized protein.	0.806
A0A163J2B5	A0A168QNY9	CDT1 domain-containing protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163J4V1	A0A163MQA6	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A163J4V1	A0A163TF89	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163J4V1	A0A168KZV1	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A163J4V1	A0A168QNY9	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163JBE1	A0A163MQA6	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A163JBE1	A0A163TF89	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163JBE1	A0A168KZV1	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A163JBE1	A0A168QNY9	Uncharacterized protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163K293	A0A163MQA6	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Uncharacterized protein.	0.711
A0A163K293	A0A163TF89	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665
A0A163K293	A0A168KZV1	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Uncharacterized protein.	0.806
A0A163K293	A0A168QNY9	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.665