A0A168PMY2 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168PMY2

Uncharacterized protein. (538 aa)

Predicted Functional Partners:

A0A168QYF9

0.812

A0A168QXP3

0.718

A0A168N442

0.717

A0A168PFM7

0.717

A0A168R5T6

0.717

A0A168SUY1

0.656

A0A168L5T1

0.583

A0A168MZE6

0.583

A0A168N7I8

0.582

A0A163K4I4

0.532

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163K4I4	A0A168L5T1	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A163K4I4	A0A168MZE6	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A163K4I4	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A163K4I4	A0A168QXP3	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.998
A0A163K4I4	A0A168SUY1	Uncharacterized protein.	Ribonuclease P protein subunit.	0.998
A0A168L5T1	A0A163K4I4	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A168L5T1	A0A168MZE6	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A168L5T1	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A168L5T1	A0A168QXP3	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.993
A0A168L5T1	A0A168SUY1	Uncharacterized protein.	Ribonuclease P protein subunit.	0.994
A0A168MZE6	A0A163K4I4	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A168MZE6	A0A168L5T1	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A168MZE6	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A168MZE6	A0A168QXP3	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.993
A0A168MZE6	A0A168SUY1	Uncharacterized protein.	Ribonuclease P protein subunit.	0.994
A0A168N442	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.717
A0A168N442	A0A168QYF9	Uncharacterized protein.	SAM-dependent MTase TRM10-type domain-containing protein.	0.946
A0A168N7I8	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A168PFM7	A0A168PMY2	Uncharacterized protein.	Uncharacterized protein.	0.717
A0A168PFM7	A0A168QYF9	Uncharacterized protein.	SAM-dependent MTase TRM10-type domain-containing protein.	0.946