STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS75121.1Polysaccharide transporter, PST family. (510 aa)    
Predicted Functional Partners:
SIS75137.1
UDPglucose 6-dehydrogenase.
  
  
 0.941
SIS75038.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.935
SIS75086.1
Polysaccharide pyruvyl transferase.
 
  
 0.869
SIT15401.1
UDPglucose 6-dehydrogenase.
  
  
 0.848
SIS75071.1
Glycosyl transferase family 2.
 
  
 0.823
SIS74974.1
Capsular exopolysaccharide family.
 
  
 0.775
SIS93043.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.775
SIS75105.1
Predicted phosphohydrolase or phosphomutase, AlkP superfamily.
       0.743
SIS75313.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.660
SIS74990.1
Polysaccharide export outer membrane protein.
 
  
 0.647
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.