STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001224Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
CU098_002467
Uncharacterized protein.
   
 0.998
CU098_006558
Uncharacterized protein.
   
 0.998
CU098_002125
Uncharacterized protein.
    
 0.982
SEH1
Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.
    
 0.981
NSP1
FG-nucleoporin nsp1.
   
 0.980
SEC13
GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.
    
 0.977
CU098_010663
Peptidase S59 domain-containing protein.
   
 0.965
CU098_013435
Peptidase S59 domain-containing protein.
   
 0.965
CU098_011222
Uncharacterized protein.
    
 
 0.946
GLE1
Nuclear pore complex nucleoporin component.
    
 0.945
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.