STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4_2Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (152 aa)    
Predicted Functional Partners:
DID4
ESCRT-III subunit protein did4.
    
 0.989
IST1_2
Vacuolar protein sorting-associated protein ist1.
   
 0.989
DID2_1
Vacuolar-sorting protein SNF7.
   
 0.982
SNF7_1
ESCRT-III subunit protein snf7.
    
 0.982
SNF7_2
ESCRT-III subunit protein snf7.
    
 0.982
VPS20
Vacuolar protein sorting-associated protein 20.
    
 0.982
DID2_2
Vacuolar-sorting protein SNF7.
   
 0.982
CHMP6
Charged multivesicular body protein 6.
    
 0.982
IST1_1
Vacuolar protein sorting-associated protein ist1.
   
 0.980
CHMP3
Charged multivesicular body protein 3.
   
 0.955
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.