STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASA1ASTRA complex subunit. (167 aa)    
Predicted Functional Partners:
TAF9
Transcription initiation factor TFIID subunit 9.
    
 0.860
TAF10
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.859
CU098_007486
Uncharacterized protein.
   
 0.846
CU098_012456
Uncharacterized protein.
    
 0.835
CU098_009794
TAFII55_N domain-containing protein.
    
 0.834
CU098_004257
DOC domain-containing protein.
    
 0.833
TAF11
Transcription initiation factor TFIID subunit 11.
    
 0.830
CU098_000453
ANAPC4 domain-containing protein.
    
 0.829
TAF13
Transcription initiation factor TFIID subunit 13.
    
 0.828
CU098_003446
Uncharacterized protein.
    
 0.826
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (30%) [HD]