STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005836Carboxypeptidase; Belongs to the peptidase S10 family. (438 aa)    
Predicted Functional Partners:
CU098_011347
Glyco_hydro_35 domain-containing protein; Belongs to the glycosyl hydrolase 35 family.
   
 0.810
CU098_011975
Uncharacterized protein.
   
 0.810
CU098_003097
Uncharacterized protein.
   
 
 0.717
YOS9
Protein OS-9.
   
 
 0.680
KAR2
ATPase with role in protein import into the ER; Belongs to the heat shock protein 70 family.
    
 
 0.561
HRD1_2
E3 ubiquitin-protein ligase hrd1.
    
 
 0.546
HRD1_1
E3 ubiquitin-protein ligase hrd1.
    
 
 0.546
HRD3_3
ERAD-associated protein.
    
 
 0.534
HRD3_2
ERAD-associated protein.
    
 
 0.534
CU098_004805
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.527
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.