STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003763Uncharacterized protein. (500 aa)    
Predicted Functional Partners:
CU098_011875
Uncharacterized protein.
    
  0.746
CU098_007840
YTH domain-containing protein.
    
  0.663
CU098_001964
Uncharacterized protein.
    
 0.645
CU098_010616
Uncharacterized protein.
    
 0.645
MRP4
37S ribosomal protein, mitochondrial.
   
  0.614
CU098_013251
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.614
CU098_008268
Uncharacterized protein.
   
  0.613
RSM10
Mitochondrial 37S ribosomal protein rsm10.
    
  0.611
RSM24
37S ribosomal protein S24, mitochondrial.
    
  0.611
CU098_004614
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
  0.603
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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