STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004267Protein kinase domain-containing protein. (551 aa)    
Predicted Functional Partners:
CMD1_1
Calmodulin; Belongs to the calmodulin family.
   
 0.790
CU098_012090
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.790
CU098_012214
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.790
CMD1_2
Calmodulin; Belongs to the calmodulin family.
   
 0.790
ATG6
Autophagy protein 6.
    
 0.684
HOG1_1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
0.682
CU098_007340
Protein kinase domain-containing protein.
    
 0.669
CU098_003528
Microtubule-associated protein.
    
  0.665
HOG1_2
MAPK protein hog1.
    
 0.660
MPK1_1
Mitogen-activated protein kinase.
    
0.660
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.