STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL8B_260S ribosomal protein L8B. (89 aa)    
Predicted Functional Partners:
RPL32
60S ribosomal protein L32.
   
 0.998
RPL35
60S ribosomal protein L35.
  
 0.998
RPL5
60S ribosomal protein L5.
  
 0.998
CU098_002542
Ribos_L4_asso_C domain-containing protein.
  
 0.998
CU098_013795
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.998
CU098_000033
Ribosomal_L16 domain-containing protein.
  
 0.997
CU098_009431
Ribosomal_L18e/L15P domain-containing protein.
  
 0.997
RPL28_3
60S ribosomal protein L28.
   
 0.997
RPL7
60S ribosomal protein L7.
  
 0.997
CU098_012074
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.997
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.