STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE2_1Aminopeptidase. (887 aa)    
Predicted Functional Partners:
SHM2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.784
RFA2
Replication factor A protein 2.
   
 
 0.758
TRP5_1
Tryptophan synthase.
    
 0.754
TRP5_2
Tryptophan synthase.
    
 0.754
TRP5_3
Tryptophan synthase.
    
 0.754
AAT2_1
Aspartate aminotransferase, cytoplasmic.
   
 0.752
AAT2_2
Aspartate aminotransferase.
   
 0.752
LAP-2_1
Cytosol aminopeptidase, catalytic domain.
  
 0.746
LAP3_1
Bleomycin hydrolase.
  
 0.746
LAP-2_2
Cytosol aminopeptidase, catalytic domain.
  
 0.746
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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