STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB05734.1AMP-binding enzyme. (237 aa)    
Predicted Functional Partners:
SKB03429.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.963
SKB00977.1
Acyl transferase domain-containing protein.
  
 0.891
SKA80331.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.874
SKA86491.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
    
 0.823
SKA92431.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.819
SKB03434.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.723
SKB00134.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.683
SKB03424.1
Hypothetical protein.
 
 
 0.650
SKA75952.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.646
SKB04820.1
Carbon starvation protein.
   
    0.627
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.