STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB07763.1Cysteine desulfurase. (383 aa)    
Predicted Functional Partners:
SKB08998.1
Nitrogen fixation protein NifU.
 
 0.978
SKB00149.1
Nitrogen fixation protein NifU.
  
 0.916
SKB03821.1
Adenylyltransferase and sulfurtransferase.
   
 0.875
SKB06673.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
 0.753
SKB07607.1
Cysteine desulfurase.
  
  
 
0.753
SKA76986.1
Hydroxyacylglutathione hydrolase.
   
 0.730
SKA98253.1
Transcriptional regulator, BadM/Rrf2 family.
 
 
 0.685
SKB00146.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
0.647
SKA97118.1
Transcriptional regulator, BadM/Rrf2 family.
  
 
 0.643
SKB05422.1
Transcriptional regulator.
  
 
 0.643
Your Current Organism:
Prosthecobacter debontii
NCBI taxonomy Id: 48467
Other names: ATCC 700200, P. debontii, Prosthecobacter FC3, Prosthecobacter sp. FC-3, strain FC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.