STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5973KEGG: aba:Acid345_0857 hypothetical protein; SPTR: B9Z3M4 Putative uncharacterized protein. (418 aa)    
Predicted Functional Partners:
Krac_5966
InterPro IPR011747; KEGG: scl:sce2086 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A9FV76 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
       0.664
Krac_5967
KEGG: scl:sce2087 hypothetical protein; SPTR: A9FV80 Putative uncharacterized protein.
       0.664
Krac_5969
Cell surface receptor IPT/TIG domain protein; InterPro IPR014756:IPR002909; KEGG: cyc:PCC7424_3814 hypothetical protein; PFAM: cell surface receptor IPT/TIG domain protein; SPTR: B7KJB1 Putative uncharacterized protein; PFAM: IPT/TIG domain.
       0.664
Krac_5970
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: npu:Npun_R3462 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: B2J120 AAA ATPase, central domain protein; PFAM: ATPase family associated with various cellular activities (AAA).
       0.650
Krac_5968
KEGG: chl:Chy400_2329 hypothetical protein; SPTR: B9LI05 Putative uncharacterized protein.
       0.645
Krac_5971
KEGG: scl:sce2091 hypothetical protein; SPTR: A9FV92 Putative uncharacterized protein.
       0.645
Krac_5972
KEGG: aba:Acid345_0857 hypothetical protein; SPTR: B9Z3M4 Putative uncharacterized protein.
      
0.645
Krac_5974
KEGG: scl:sce2092 hypothetical protein; SPTR: A9FV96 Putative uncharacterized protein.
       0.612
Krac_5975
KEGG: scl:sce2093 hypothetical protein; SPTR: A9FV98 Putative uncharacterized protein.
       0.612
Krac_5976
KEGG: scl:sce2094 hypothetical protein; SPTR: A9FVA2 Putative uncharacterized protein.
       0.594
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.