STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6572Transposase IS4 family protein; InterPro IPR012337:IPR003531:IPR002559; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain. (378 aa)    
Predicted Functional Partners:
Krac_3918
InterPro IPR012337; KEGG: rca:Rcas_1713 hypothetical protein; SPTR: A7NFU6 Putative uncharacterized protein.
  
     0.660
EFH89998.1
Hypothetical protein; InterPro IPR017871; KEGG: rca:Rcas_3465 hypothetical protein; SPTR: A7NHU5 Putative uncharacterized protein; manually curated.
  
     0.642
Krac_3263
Conserved hypothetical protein; InterPro IPR012337:IPR017871; KEGG: rca:Rcas_1713 hypothetical protein; SPTR: A7NFU6 Putative uncharacterized protein.
  
     0.639
Krac_3895
InterPro IPR002559; KEGG: sti:Sthe_2439 transposase IS4 family protein; PFAM: transposase IS4 family protein; SPTR: D1C9T4 Transposase IS4 family protein.
  
     0.637
Krac_4010
Conserved hypothetical protein; InterPro IPR012337:IPR017871; KEGG: rca:Rcas_1713 hypothetical protein; SPTR: A7NFU6 Putative uncharacterized protein.
  
     0.629
Krac_0751
KEGG: rca:Rcas_3465 hypothetical protein; SPTR: A7NHU5 Putative uncharacterized protein.
  
     0.611
Krac_9468
KEGG: rca:Rcas_3465 hypothetical protein; SPTR: A7NHU5 Putative uncharacterized protein.
  
     0.611
Krac_3536
KEGG: rca:Rcas_3465 hypothetical protein; SPTR: A7NHU5 Putative uncharacterized protein.
  
     0.604
Krac_3464
Phospholipid/glycerol acyltransferase; InterPro IPR002123; KEGG: sti:Sthe_2077 protein of unknown function DUF422; PFAM: phospholipid/glycerol acyltransferase; SPTR: D1C5V4 Putative uncharacterized protein; PFAM: Acyltransferase.
  
     0.558
Krac_6571
Integrase family protein; InterPro IPR011010:IPR002104:IPR013762; KEGG: cac:CA_P0080 site-specific tyrosine recombinase XerC; PFAM: integrase family protein; SPTR: Q97TM0 Site-Specific Recombinase, Xerd; PFAM: Phage integrase family.
       0.551
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.