STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7804Glycosyl transferase family 39; InterPro IPR003342; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; PFAM: glycosyl transferase family 39; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (610 aa)    
Predicted Functional Partners:
Krac_7803
YYY membrane protein; COGs: COG5427 Uncharacterized membrane protein; InterPro IPR018746; KEGG: mba:Mbar_A0504 hypothetical protein; PFAM: YYY membrane protein; SPTR: Q46F56 Putative uncharacterized protein; PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain.
     0.964
Krac_9987
YYY membrane protein; COGs: COG5427 Uncharacterized membrane protein; InterPro IPR018746; KEGG: mba:Mbar_A0504 hypothetical protein; PFAM: YYY membrane protein; SPTR: Q46F56 Putative uncharacterized protein; PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain.
     0.962
Krac_7802
Glycosyl transferase family 39; COGs: COG4745 membrane-bound mannosyltransferase; InterPro IPR003342:IPR019962; KEGG: ttr:Tter_1036 membrane-bound mannosyltransferase-like protein; PFAM: glycosyl transferase family 39; SPTR: D1CG96 Membrane-bound mannosyltransferase-like protein; TIGRFAM: conserved hypothetical protein TIGR03663.
 
  
  0.872
Krac_8789
Amine oxidase; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR000759:IPR002937; KEGG: sen:SACE_0182 hypothetical protein; PFAM: amine oxidase; SPTR: A4F660 Protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase.
 
    0.872
EFH90506.1
Primosome, DnaD subunit; InterPro IPR006343; KEGG: rca:Rcas_3989 primosome, DnaD subunit; PFAM: DnaD and phage-associated region; SPTR: A7NR26 Primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.756
EFH90816.1
COGs: COG2178 RNA-binding protein of the translin family; InterPro IPR002848; KEGG: sti:Sthe_0893 translin; PFAM: Translin; SPTR: D1C263 Translin; PFAM: Translin family.
  
     0.740
Krac_7968
KEGG: tro:trd_A0879 uroporphyrinogen decarboxylase; SPTR: D1CA85 Uroporphyrinogen decarboxylase (URO-D); PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
  
    0.736
EFH89261.1
Protein of unknown function DUF2085, transmembrane; COGs: COG3815 membrane protein; InterPro IPR018229:IPR019206; KEGG: tro:trd_0346 hypothetical protein; PFAM: Protein of unknown function DUF2085, transmembrane; SPTR: B9KY03 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2085).
  
     0.735
Krac_7646
Conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: hau:Haur_4436 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A9AZ28 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
  
 0.735
Krac_8842
KEGG: sti:Sthe_0950 hypothetical protein; SPTR: D1C2C0 Putative uncharacterized protein.
  
     0.730
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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