STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7981COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR003018:IPR003661:IPR 005467:IPR004358; KEGG: cyn:Cyan7425_1390 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: B8HNN2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (463 aa)    
Predicted Functional Partners:
Krac_9408
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: rmr:Rmar_0513 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: D0MEW5 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain.
 
 0.978
Krac_9842
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: phe:Phep_2657 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A6E8D4 Response regulator receiver; PFAM: Response regulator receiver domain.
 
 
 0.969
Krac_5259
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: phe:Phep_3340 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A6E8D4 Response regulator receiver; PFAM: Response regulator receiver domain.
 
 0.956
EFH90091.1
Response regulator receiver sensor signal transduction histidine kinase; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003661:IPR003594:IPR011006:IPR 005467; KEGG: gem:GM21_2551 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; SPTR: B4DC57 Sensor protein; PFAM: Response regulator receiver domain; His Kina [...]
 
 0.949
Krac_6924
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: cti:RALTA_A0722 putative response regulator receiver, CheY family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A7BTN9 Response regulator receiver protein; PFAM: Response regulator receiver domain.
 
 
 0.933
EFH88743.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Q3M [...]
 
0.915
EFH88736.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082:IPR002052; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; [...]
 
0.913
Krac_6284
Histidine kinase; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003594:IPR009082:IPR003661:IPR004358:IPR 005467; KEGG: pfs:PFLU0637 putative two-component system, sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C3K7F1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
 
  0.906
Krac_4527
PAS/PAC sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 009082:IPR001610:IPR003661:IPR004358:IPR013767:IPR013655; KEGG: phe:Phep_3913 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A6EDD2 Sensor protein; TIGRFAM: PAS sensor pr [...]
 
0.901
Krac_8832
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: mxa:MXAN_4640 sensor histidine kinase/response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1D3G7 Sensor protein; PFAM: Response regulator receiver domain.
 
 0.900
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.